useDynLib(RaceID, .registration=TRUE)
importFrom(Rcpp, evalCpp)
# Generated by roxygen2: do not edit by hand

export(CCcorrect)
export(Ltree)
export(SCseq)
export(Seurat2SCseq)
export(barplotgene)
export(baseLineVar)
export(branchcells)
export(calcAlphaG)
export(calcVar)
export(calcVarFit)
export(cellsfromtree)
export(cleanNN)
export(clustdiffgenes)
export(clustexp)
export(clustheatmap)
export(compMean)
export(compNoise)
export(compTBNoise)
export(compdist)
export(compentropy)
export(compfr)
export(compmedoids)
export(comppvalue)
export(compscore)
export(comptsne)
export(compumap)
export(corrVar)
export(createKnnMatrix)
export(diffNoisyGenes)
export(diffNoisyGenesTB)
export(diffexpnb)
export(diffgenes)
export(extractCounts)
export(filterdata)
export(findoutliers)
export(fitBackVar)
export(fitGammaRt)
export(fitLogVarLogMean)
export(fitNBtb)
export(fitNBtbCl)
export(fractDotPlot)
export(getExpData)
export(getFilteredCounts)
export(getNode)
export(getfdata)
export(getproj)
export(graphCluster)
export(imputeexp)
export(inspectKNN)
export(lineagegraph)
export(maxNoisyGenes)
export(maxNoisyGenesTB)
export(noiseBaseFit)
export(plotB)
export(plotBackVar)
export(plotDiffNoise)
export(plotExpNoise)
export(plotMV)
export(plotNoiseModel)
export(plotPC)
export(plotPP)
export(plotPT)
export(plotPearsonRes)
export(plotQQ)
export(plotQuantMap)
export(plotRegNB)
export(plotTrProbs)
export(plotUMINoise)
export(plotbackground)
export(plotdiffgenes)
export(plotdiffgenesnb)
export(plotdimsat)
export(plotdistanceratio)
export(plotexpmap)
export(plotfeatmap)
export(plotgraph)
export(plotjaccard)
export(plotlabelsmap)
export(plotlinkpv)
export(plotlinkscore)
export(plotmap)
export(plotmarkergenes)
export(plotoutlierprobs)
export(plotsaturation)
export(plotsensitivity)
export(plotsilhouette)
export(plotspantree)
export(plotsymbolsmap)
export(postfntb)
export(priorfn)
export(projback)
export(projcells)
export(projenrichment)
export(pruneKnn)
export(pseudoTime)
export(quantKnn)
export(rfcorrect)
export(testPrior)
export(transitionProbs)
export(updateSC)
export(varRegression)
export(violinMarkerPlot)
exportClasses(Ltree)
exportClasses(SCseq)
import(FateID)
import(Matrix)
import(RColorBrewer)
import(Rtsne)
import(ggplot2)
import(harmony)
import(igraph)
import(matrixStats)
import(methods)
import(parallel)
import(pheatmap)
import(princurve)
import(umap)
importFrom(FNN,get.knn)
importFrom(MASS,fitdistr)
importFrom(MASS,glm.nb)
importFrom(MASS,theta.md)
importFrom(MASS,theta.ml)
importFrom(RColorBrewer,brewer.pal)
importFrom(Rtsne,Rtsne)
importFrom(cluster,pam)
importFrom(cluster,silhouette)
importFrom(compiler,cmpfun)
importFrom(coop,pcor)
importFrom(ggplot2,ggplot)
importFrom(grDevices,adjustcolor)
importFrom(grDevices,colorRamp)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,rainbow)
importFrom(grDevices,rgb)
importFrom(graphics,abline)
importFrom(graphics,arrows)
importFrom(graphics,axis)
importFrom(graphics,barplot)
importFrom(graphics,box)
importFrom(graphics,boxplot)
importFrom(graphics,hist)
importFrom(graphics,layout)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,rect)
importFrom(graphics,text)
importFrom(ica,icafast)
importFrom(irlba,irlba)
importFrom(leiden,leiden)
importFrom(locfit,locfit)
importFrom(locfit,lp)
importFrom(parallel,detectCores)
importFrom(parallel,parApply)
importFrom(pheatmap,pheatmap)
importFrom(quadprog,solve.QP)
importFrom(randomForest,randomForest)
importFrom(runner,mean_run)
importFrom(stats,aggregate)
importFrom(stats,approx)
importFrom(stats,approxfun)
importFrom(stats,as.dist)
importFrom(stats,as.formula)
importFrom(stats,binom.test)
importFrom(stats,cmdscale)
importFrom(stats,coef)
importFrom(stats,coefficients)
importFrom(stats,cor)
importFrom(stats,dcauchy)
importFrom(stats,density)
importFrom(stats,df.residual)
importFrom(stats,dist)
importFrom(stats,dnbinom)
importFrom(stats,fisher.test)
importFrom(stats,fitted)
importFrom(stats,glm)
importFrom(stats,hclust)
importFrom(stats,kmeans)
importFrom(stats,lm)
importFrom(stats,lm.fit)
importFrom(stats,loess)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,optimize)
importFrom(stats,p.adjust)
importFrom(stats,pnbinom)
importFrom(stats,predict)
importFrom(stats,quantile)
importFrom(stats,residuals)
importFrom(stats,rpois)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(stats,var)
importFrom(stats,wilcox.test)
importFrom(vegan,spantree)
