# Generated by roxygen2: do not edit by hand

export(UpSet_plot)
export(active_subnetwork_search)
export(annotate_term_genes)
export(build_network)
export(build_score_context)
export(cluster_enriched_terms)
export(cluster_graph_vis)
export(combine_pathfindR_results)
export(combined_results_graph)
export(create_kappa_matrix)
export(create_term_gene_graph)
export(create_term_gene_plot)
export(enrichment)
export(enrichment_analyses)
export(enrichment_chart)
export(fetch_gene_sets)
export(filter_active_subnetworks)
export(fuzzy_term_clustering)
export(get_active_subnetworks)
export(get_gene_sets_list)
export(get_pin_file)
export(hierarchical_term_clustering)
export(hyperg_test)
export(input_processing)
export(input_testing)
export(plot_scores)
export(return_pin_path)
export(run_pathfindR)
export(score_terms)
export(summarize_enrichment_results)
export(term_gene_heatmap)
export(visualize_KEGG_diagram)
export(visualize_active_subnetworks)
export(visualize_term_interactions)
export(visualize_terms)
import(doParallel)
import(foreach)
import(ggplot2)
import(ggraph)
import(graphics)
import(knitr)
import(parallel)
import(pathfindR.data)
import(rmarkdown)
importFrom(Rcpp,sourceCpp)
importFrom(ggkegg,pathway)
importFrom(httr,GET)
importFrom(httr,content)
importFrom(httr,http_error)
importFrom(httr,status_code)
importFrom(httr,timeout)
useDynLib(pathfindR, .registration = TRUE)
