Package: panelPomp
Type: Package
Title: Inference for Panel Partially Observed Markov Processes
Version: 1.8.0.0
Authors@R: c(person(given="Carles",family="Breto",role="aut",email="carles.breto@uv.es",comment=c(ORCID="0000-0003-4695-4902")),
	person(given=c("Edward","L."),family="Ionides",role="aut",comment=c(ORCID="0000-0002-4190-0174")),
	person(given=c("Aaron","A."),family="King",role="aut",comment=c(ORCID="0000-0001-6159-3207")),
	person(given="Jesse",family="Wheeler",role=c("aut","cre"),email="jesse.wheeler@usu.edu",comment=c(ORCID="0000-0003-3941-3884")),
	person(given="Aaron",family="Abkemeier",role=c("ctb"),email="aaronabk@umich.edu"))
Description: Data analysis based on panel partially-observed Markov process (PanelPOMP) models. To implement such models, simulate them and fit them to panel data, 'panelPomp' extends some of the facilities provided for time series data by the 'pomp' package. Implemented methods include filtering (panel particle filtering) and maximum likelihood estimation (Panel Iterated Filtering) as proposed in Breto, Ionides and King (2020) "Panel Data Analysis via Mechanistic Models" <doi:10.1080/01621459.2019.1604367>.
License: GPL-3
Depends: R(>= 4.1.0), pomp(>= 4.5.2)
Imports: methods
Encoding: UTF-8
Collate: 'panelPomp-package.R' 'aaa.R' 'contacts.R' 'generics.R'
        'get_col_row.R' 'panel_loglik.R' 'panel_logmeanexp.R'
        'panelPomp.R' 'panelPomp_methods.R' 'params.R' 'pfilter.R'
        'pfilter_methods.R' 'mif2.R' 'mif2_methods.R' 'panelGompertz.R'
        'panelGompertzLikelihood.R' 'panelMeasles.R'
        'panelRandomWalk.R' 'panel_designs.R' 'plot.R' 'simulate.R'
        'twentycities.R' 'uk_measles.R'
Suggests: knitr, rmarkdown, bookdown
VignetteBuilder: knitr
LazyData: true
Config/roxygen2/version: 8.0.0
NeedsCompilation: yes
Packaged: 2026-07-07 20:16:53 UTC; jessewheeler
Author: Carles Breto [aut] (ORCID: <https://orcid.org/0000-0003-4695-4902>),
  Edward L. Ionides [aut] (ORCID:
    <https://orcid.org/0000-0002-4190-0174>),
  Aaron A. King [aut] (ORCID: <https://orcid.org/0000-0001-6159-3207>),
  Jesse Wheeler [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3941-3884>),
  Aaron Abkemeier [ctb]
Maintainer: Jesse Wheeler <jesse.wheeler@usu.edu>
Repository: CRAN
Date/Publication: 2026-07-07 20:50:02 UTC
Built: R 4.5.3; x86_64-w64-mingw32; 2026-08-22 02:14:56 UTC; windows
Archs: x64
