Visualize Spatiotemporal Tumor Evolution with Jellyfish Plots

---

Documentation for package ‘jellyfisher’ version 1.1.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

add_inferred_sample	Insert an a hypothetical inferred sample into the sample tree and set it as the parent of specified samples.
extract_tables_from_clonevol	Extract Data for Jellyfisher from ClonEvol Results
jellyfisher	Creates a Jellyfish plot
jellyfisher-shiny	Shiny bindings for jellyfisher
jellyfisherOutput	Shiny bindings for jellyfisher
jellyfisher_example_tables	Jellyfisher example data
renderJellyfisher	Shiny bindings for jellyfisher
select_patients	Filter Jellyfish tables by patient
set_parents	Set parents for samples
set_ranks	Set ranks for samples
validate_tables	Validate Jellyfish tables