# Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present

## Documentation for package ‘allelematch’ version 3.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

allelematch-package | Identification of unique multilocus genotypes
allelematch | Identification of unique multilocus genotypes
allelematch-tutorial | Identification of unique multilocus genotypes
amAlleleFreq | Determine allele frequencies
amCluster | Clustering of multilocus genotypes
amCSSForHTML | Produce cascading style sheet (CSS) for HTML
amCSV.amCluster | Clustering of multilocus genotypes
amCSV.amPairwise | Pairwise matching of multilocus genotypes
amCSV.amUnique | Identification of unique genotypes
amDataset | Prepare a dataset for use with allelematch
amExample1 | Data sets to support the tutorials in the supplementary documentation and examples in the manual
amExample2 | Data sets to support the tutorials in the supplementary documentation and examples in the manual
amExample3 | Data sets to support the tutorials in the supplementary documentation and examples in the manual
amExample4 | Data sets to support the tutorials in the supplementary documentation and examples in the manual
amExample5 | Data sets to support the tutorials in the supplementary documentation and examples in the manual
amExampleData | Data sets to support the tutorials in the supplementary documentation and examples in the manual
amHTML.amCluster | Clustering of multilocus genotypes
amHTML.amPairwise | Pairwise matching of multilocus genotypes
amHTML.amUnique | Identification of unique genotypes
amMatrix | Produce a dissimilarity matrix for pairs of multilocus genotypes
amPairwise | Pairwise matching of multilocus genotypes
amPreCheck | Pre-Screen an amDataset Object for Severe Missing Data Loads
amUnique | Identification of unique genotypes
amUniqueProfile | Determine optimal parameter values for the identification of unique genotypes
print.amAlleleFreq | Determine allele frequencies
print.amDataset | Prepare a dataset for use with allelematch
summary.amCluster | Clustering of multilocus genotypes
summary.amPairwise | Pairwise matching of multilocus genotypes
summary.amUnique | Identification of unique genotypes