* using log directory 'd:/Rcompile/CRANpkg/local/4.5/NMsim.Rcheck' * using R version 4.5.1 (2025-06-13 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'NMsim/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'NMsim' version '0.2.3' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... INFO Package which this enhances but not available for checking: 'simpar' * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'NMsim' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking whether startup messages can be suppressed ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [11s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [4s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [25s] ERROR Running 'testthat.R' [25s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(NMsim) NMsim 0.2.3. Browse NMsim documentation at https://NMautoverse.github.io/NMsim/ > > test_check("NMsim") [ FAIL 6 | WARN 0 | SKIP 0 | PASS 139 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_NMcreateMatLines.R:66:9'): Full covariance matrix ──────────── `res` has changed from known value recorded in 'testReference/NMcreateMatLines_03.rds'. 5/5 mismatches x[1]: " BLOCK(5) FIX 0.00421346" y[1]: " BLOCK(5) FIX 0.00253814" x[2]: "0.00216572 0.00341787" y[2]: "0.00113554 0.00292987" x[3]: "-0.0026693 -0.00208163 0.0119622" y[3]: "-0.00157543 -0.000280481 0.0263268" x[4]: "0.00802184 0.00513707 -0.0243139 0.076761" y[4]: "0.0044503 0.00198917 -0.0579947 0.159833" x[5]: "0.00111323 0.000867854 -0.0048564 0.0174466 0.00596833" y[5]: "0.0012677 0.000341358 -0.0203661 0.0535258 0.0195262" Backtrace: ▆ 1. └─testthat::expect_equal_to_reference(res, fileRef) at test_NMcreateMatLines.R:66:9 2. └─testthat::expect_known_value(..., update = update) ── Failure ('test_NMsim.R:295:9'): sizes ─────────────────────────────────────── `mod` has changed from known value recorded in 'testReference/NMsim_sizes_05.rds'. Lengths differ: 67 is not 66 Backtrace: ▆ 1. └─testthat::expect_equal_to_reference(mod, fileRef) at test_NMsim.R:295:9 2. └─testthat::expect_known_value(..., update = update) ── Failure ('test_NMsim.R:326:9'): inits - modify parameter ──────────────────── `mod` has changed from known value recorded in 'testReference/NMsim_inits_06.rds'. Lengths differ: 70 is not 69 Backtrace: ▆ 1. └─testthat::expect_equal_to_reference(mod, fileRef) at test_NMsim.R:326:9 2. └─testthat::expect_known_value(..., update = update) ── Failure ('test_NMsim_NWPRI.R:66:9'): NMsim_NWPRI ──────────────────────────── mod$THETAPV has changed from known value recorded in 'testReference/NMsim_NWPRI_01_THETAPV.rds'. 5/5 mismatches x[1]: "$THETAPV BLOCK(5) FIX 0.00421346" y[1]: "$THETAPV BLOCK(5) FIX 0.00253814" x[2]: "0.00216572 0.00341787" y[2]: "0.00113554 0.00292987" x[3]: "-0.0026693 -0.00208163 0.0119622" y[3]: "-0.00157543 -0.000280481 0.0263268" x[4]: "0.00802184 0.00513707 -0.0243139 0.076761" y[4]: "0.0044503 0.00198917 -0.0579947 0.159833" x[5]: "0.00111323 0.000867854 -0.0048564 0.0174466 0.00596833" y[5]: "0.0012677 0.000341358 -0.0203661 0.0535258 0.0195262" Backtrace: ▆ 1. └─testthat::expect_equal_to_reference(...) at test_NMsim_NWPRI.R:66:9 2. └─testthat::expect_known_value(..., update = update) ── Failure ('test_NMsim_NWPRI.R:68:9'): NMsim_NWPRI ──────────────────────────── `mod` has changed from known value recorded in 'testReference/NMsim_NWPRI_01.rds'. Component "THETAPV": 5 string mismatches Backtrace: ▆ 1. └─testthat::expect_equal_to_reference(mod, fileRef) at test_NMsim_NWPRI.R:68:9 2. └─testthat::expect_known_value(..., update = update) ── Failure ('test_NMsim_VarCov.R:68:5'): Basic ───────────────────────────────── `mod` has changed from known value recorded in 'testReference/NMsim_VarCov_01a.rds'. Component "SIGMA": 1 string mismatch Backtrace: ▆ 1. └─testthat::expect_equal_to_reference(mod, fileRef_a) at test_NMsim_VarCov.R:68:5 2. └─testthat::expect_known_value(..., update = update) [ FAIL 6 | WARN 0 | SKIP 0 | PASS 139 ] Error: Test failures Execution halted * checking PDF version of manual ... [22s] OK * checking HTML version of manual ... [12s] OK * DONE Status: 1 ERROR