* using log directory 'd:/Rcompile/CRANpkg/local/4.5/maraca.Rcheck' * using R version 4.5.1 (2025-06-13 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'maraca/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'maraca' version '1.0.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'maraca' can be installed ... OK * checking installed package size ... INFO installed size is 8.4Mb sub-directories of 1Mb or more: doc 7.3Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [2s] OK * checking loading without being on the library search path ... [2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [6s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [3s] ERROR Running examples in 'maraca-Ex.R' failed The error most likely occurred in: > ### Name: component_plot > ### Title: Plotting components of win odds > ### Aliases: component_plot component_plot.default component_plot.maraca > ### component_plot.hce > > ### ** Examples > > > data(hce_scenario_a) > > maraca_dat <- maraca(data = hce_scenario_a, + step_outcomes = c("Outcome I", "Outcome II", + "Outcome III", "Outcome IV"), + last_outcome = "Continuous outcome", + fixed_followup_days = 3 * 365, + column_names = c(outcome = "GROUP", + arm = "TRTP", + value = "AVAL0"), + arm_levels = c(active = "Active", + control = "Control"), + compute_win_odds = TRUE + ) > > component_plot(maraca_dat) > > Rates_A <- c(1.72, 1.74, 0.58, 1.5, 1) > Rates_P <- c(2.47, 2.24, 2.9, 4, 6) > hce_dat <- hce::simHCE(n = 2500, TTE_A = Rates_A, TTE_P = Rates_P, + CM_A = -3, CM_P = -6, CSD_A = 16, CSD_P = 15, fixedfy = 3, + seed = 31337) > > component_plot(hce_dat) Error in maraca(data = x, step_outcomes = step_outcomes, last_outcome = last_outcome, : Assertion on 'step_outcomes' failed: Must be of type 'character', not 'factor'. Calls: component_plot ... .maraca_from_hce_data -> maraca -> -> makeAssertion -> mstop Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [45s] ERROR Error(s) in re-building vignettes: --- re-building 'faq.Rmd' using rmarkdown Quitting from faq.Rmd:34-64 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `maraca()`: ! Assertion on 'step_outcomes' failed: Must be of type 'character', not 'factor'. --- Backtrace: ▆ 1. ├─base::plot(hce_dat, compute_win_odds = FALSE) 2. └─maraca:::plot.hce(hce_dat, compute_win_odds = FALSE) 3. └─maraca:::.maraca_from_hce_data(...) 4. └─maraca::maraca(...) 5. └─checkmate::assert_character(step_outcomes, any.missing = FALSE) 6. └─checkmate::makeAssertion(x, res, .var.name, add) 7. └─checkmate:::mstop(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'faq.Rmd' failed with diagnostics: Assertion on 'step_outcomes' failed: Must be of type 'character', not 'factor'. --- failed re-building 'faq.Rmd' --- re-building 'maraca.Rmd' using rmarkdown Quitting from maraca.Rmd:172-180 [unnamed-chunk-2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `maraca()`: ! Assertion on 'step_outcomes' failed: Must be of type 'character', not 'factor'. --- Backtrace: ▆ 1. ├─base::plot(...) 2. └─maraca:::plot.hce(...) 3. └─maraca:::.maraca_from_hce_data(...) 4. └─maraca::maraca(...) 5. └─checkmate::assert_character(step_outcomes, any.missing = FALSE) 6. └─checkmate::makeAssertion(x, res, .var.name, add) 7. └─checkmate:::mstop(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'maraca.Rmd' failed with diagnostics: Assertion on 'step_outcomes' failed: Must be of type 'character', not 'factor'. --- failed re-building 'maraca.Rmd' --- re-building 'mosaic.Rmd' using rmarkdown Quitting from mosaic.Rmd:133-144 [unnamed-chunk-7] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `maraca()`: ! Assertion on 'step_outcomes' failed: Must be of type 'character', not 'factor'. --- Backtrace: ▆ 1. ├─maraca::mosaic_plot(hce_dat) 2. └─maraca:::mosaic_plot.hce(hce_dat) 3. └─maraca:::.maraca_from_hce_data(...) 4. └─maraca::maraca(...) 5. └─checkmate::assert_character(step_outcomes, any.missing = FALSE) 6. └─checkmate::makeAssertion(x, res, .var.name, add) 7. └─checkmate:::mstop(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'mosaic.Rmd' failed with diagnostics: Assertion on 'step_outcomes' failed: Must be of type 'character', not 'factor'. --- failed re-building 'mosaic.Rmd' --- re-building 'otherEndpoints.Rmd' using rmarkdown --- finished re-building 'otherEndpoints.Rmd' --- re-building 'themes.Rmd' using rmarkdown --- finished re-building 'themes.Rmd' --- re-building 'validation.Rmd' using rmarkdown --- finished re-building 'validation.Rmd' --- re-building 'winOdds.Rmd' using rmarkdown Quitting from winOdds.Rmd:66-77 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `maraca()`: ! Assertion on 'step_outcomes' failed: Must be of type 'character', not 'factor'. --- Backtrace: ▆ 1. ├─maraca::component_plot(hce_dat) 2. └─maraca:::component_plot.hce(hce_dat) 3. └─maraca:::.maraca_from_hce_data(...) 4. └─maraca::maraca(...) 5. └─checkmate::assert_character(step_outcomes, any.missing = FALSE) 6. └─checkmate::makeAssertion(x, res, .var.name, add) 7. └─checkmate:::mstop(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'winOdds.Rmd' failed with diagnostics: Assertion on 'step_outcomes' failed: Must be of type 'character', not 'factor'. --- failed re-building 'winOdds.Rmd' SUMMARY: processing the following files failed: 'faq.Rmd' 'maraca.Rmd' 'mosaic.Rmd' 'winOdds.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [20s] OK * checking HTML version of manual ... [3s] OK * DONE Status: 2 ERRORs