Last updated on 2025-07-21 08:50:08 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 249.54 | 262.98 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.67 | 233.14 | 243.81 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 178.00 | 198.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.66 | 250.48 | 264.14 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 171.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 159.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 234.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/116s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.041, elapsed: 2.209 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.031, system: 0.086, elapsed: 14.903 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.014, elapsed: 0.327 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.767, system: 0.202, elapsed: 6.439 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.193, system: 0.368, elapsed: 25.019 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.038, elapsed: 2.300 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.011, system: 0.075, elapsed: 14.109 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.337 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.770, system: 0.179, elapsed: 5.836 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.207 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.148, system: 0.328, elapsed: 23.689 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.034, elapsed: 2.017 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.033, system: 0.056, elapsed: 12.294 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.010, elapsed: 0.317 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.714, system: 0.169, elapsed: 5.542 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.002, elapsed: 0.236 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.186, system: 0.236, elapsed: 1.084 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.438, system: 0.534, elapsed: 22.417 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.419, system: 0.031, elapsed: 2.089 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.097, system: 0.049, elapsed: 13.030 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.872, system: 0.222, elapsed: 6.055 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.006, elapsed: 0.234 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.339, system: 0.611, elapsed: 15.469 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.778, system: 0.963, elapsed: 38.127 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/109s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.518, system: 0.043, elapsed: 1.730 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.932, system: 0.083, elapsed: 14.153 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.552, system: 0.182, elapsed: 5.879 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.213 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.884, system: 0.348, elapsed: 23.086 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.515, system: 0.039, elapsed: 2.544 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.945, system: 0.063, elapsed: 11.496 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.690, system: 0.176, elapsed: 6.520 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.211 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.044, system: 0.317, elapsed: 21.969 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.035, elapsed: 1.991 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.915, system: 0.058, elapsed: 12.398 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.487, system: 0.146, elapsed: 5.269 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.239 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.072, system: 0.212, elapsed: 0.948 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.973, system: 0.497, elapsed: 22.074 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.459, system: 0.028, elapsed: 2.200 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.825, system: 0.048, elapsed: 12.666 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.266 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.556, system: 0.159, elapsed: 5.287 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.206 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.969, system: 0.541, elapsed: 14.049 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.801, system: 0.820, elapsed: 35.572 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64