Last updated on 2025-10-22 05:51:16 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.24 | 241.36 | 253.60 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.38 | 252.33 | 262.71 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 46.00 | 272.39 | 318.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 320.87 | 352.87 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.32 | 269.79 | 285.11 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.69 | 272.97 | 288.66 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 162.00 | 176.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 202.00 | 215.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: HTML version of manual
Result: NOTE
Found the following HTML validation problems:
mapi.html:317:1 (mapi.Rd:174): Warning: missing </ul> before </div>
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/111s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.486, system: 0.052, elapsed: 2.140 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.144, system: 0.315, elapsed: 13.539 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.025, elapsed: 0.376 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.061, system: 0.357, elapsed: 7.728 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.010, elapsed: 0.352 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.612, system: 0.816, elapsed: 25.184 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.637, system: 0.078, elapsed: 2.816 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.177, system: 0.269, elapsed: 16.612 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.020, elapsed: 0.359 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.966, system: 0.311, elapsed: 7.266 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.010, elapsed: 0.374 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.682, system: 0.727, elapsed: 28.343 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.730, system: 0.088, elapsed: 2.951 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.449, system: 0.086, elapsed: 9.226 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.169, system: 0.011, elapsed: 0.188 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.257, system: 0.181, elapsed: 3.557 seconds]
Computing values for grid cells...
... done. [user: 0.141, system: 0.003, elapsed: 0.146 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.018, system: 0.230, elapsed: 0.828 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.373, system: 0.632, elapsed: 18.069 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.231, system: 0.027, elapsed: 1.263 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 7.347, system: 0.032, elapsed: 7.414 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.148, system: 0.010, elapsed: 0.159 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 2.742, system: 0.150, elapsed: 2.905 seconds]
Computing values for grid cells...
... done. [user: 0.145, system: 0.004, elapsed: 0.157 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.023, system: 0.702, elapsed: 15.935 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.189, system: 0.953, elapsed: 29.155 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/143s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.747, system: 0.105, elapsed: 3.356 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.849, system: 0.286, elapsed: 11.654 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.021, elapsed: 0.364 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.678, system: 0.287, elapsed: 6.808 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.007, elapsed: 0.374 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.169, system: 0.746, elapsed: 23.644 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.627, system: 0.063, elapsed: 3.382 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.091, system: 0.320, elapsed: 15.107 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.018, elapsed: 0.420 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.749, system: 0.264, elapsed: 8.315 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.011, elapsed: 0.438 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.355, system: 0.729, elapsed: 28.841 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.053, elapsed: 3.161 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.099, system: 0.322, elapsed: 15.110 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.021, elapsed: 0.303 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.725, system: 0.322, elapsed: 5.807 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.015, elapsed: 0.255 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.068, system: 0.300, elapsed: 1.027 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.460, system: 1.077, elapsed: 26.852 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.723, system: 0.096, elapsed: 2.845 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.805, system: 0.108, elapsed: 16.079 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.013, elapsed: 0.295 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.490, system: 0.178, elapsed: 8.316 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.009, elapsed: 0.564 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.972, system: 0.552, elapsed: 22.906 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.995, system: 1.001, elapsed: 52.551 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64