Last updated on 2025-09-17 04:50:07 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.09 | 263.20 | 276.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.21 | 220.05 | 230.26 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 309.63 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.39 | 239.08 | 253.47 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 190.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 181.00 | 200.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 169.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 273.00 | 297.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.445, system: 0.038, elapsed: 1.531 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.663, system: 0.134, elapsed: 11.373 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.017, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.954, system: 0.276, elapsed: 6.493 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.190 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.984, system: 0.496, elapsed: 20.580 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.651, system: 0.076, elapsed: 2.384 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.375, system: 0.264, elapsed: 14.426 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.015, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.858, system: 0.227, elapsed: 7.609 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.006, elapsed: 0.369 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.779, system: 0.618, elapsed: 25.983 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.053, elapsed: 3.428 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.155, system: 0.157, elapsed: 13.637 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.011, elapsed: 0.235 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.893, system: 0.268, elapsed: 5.936 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.010, elapsed: 0.303 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.243, system: 0.255, elapsed: 1.652 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.867, system: 0.782, elapsed: 26.342 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.828, system: 0.114, elapsed: 3.683 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.306, system: 0.342, elapsed: 13.778 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.015, elapsed: 0.433 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.811, system: 0.191, elapsed: 6.620 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.290 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.302, system: 0.458, elapsed: 18.423 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.276, system: 1.171, elapsed: 44.486 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/112s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.066, elapsed: 2.167 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.172, system: 0.291, elapsed: 13.178 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.018, elapsed: 0.232 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.693, system: 0.269, elapsed: 5.651 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.008, elapsed: 0.249 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.305, system: 0.681, elapsed: 22.185 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.732, system: 0.075, elapsed: 2.547 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.326, system: 0.320, elapsed: 13.881 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.018, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.699, system: 0.251, elapsed: 4.565 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.008, elapsed: 0.191 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.634, system: 0.707, elapsed: 22.112 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.610, system: 0.058, elapsed: 2.006 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.953, system: 0.254, elapsed: 10.180 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.018, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.519, system: 0.221, elapsed: 4.097 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.017, elapsed: 0.241 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.077, system: 0.260, elapsed: 0.959 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.127, system: 0.870, elapsed: 18.573 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.658, system: 0.064, elapsed: 2.324 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.986, system: 0.123, elapsed: 13.690 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.014, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.488, system: 0.163, elapsed: 5.049 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.334 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.982, system: 0.437, elapsed: 19.302 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.092, system: 0.846, elapsed: 41.907 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64